Signature	SharedGeneNum	SharedGenes	AvgPval	BreastC_M26 Chr17q21-25_UniqueNum	BreastC_M26 Chr17q21-25_pVal	BreastC_M26 Chr17q21-25_Unique	BreastC_M5 Chr17q11-12,21_UniqueNum	BreastC_M5 Chr17q11-12,21_pVal	BreastC_M5 Chr17q11-12,21_Unique
AGUIRRE_PANCREATIC_CANCER_COPY_NUMBER_UP	0		3.66273629137e-10	20	7.32547258177e-10	ANKRD40|CASKIN2|COX11|ITGA3|KAT7|LRRC59|LUC7L3|NME1|PCTP|PDK2|PHB|RSAD1|SLC35B1|SNF8|SPAG9|SPATA20|SPOP|UBE2Z|UTP18|XYLT2	29	9.75159973513e-20	AARSD1|ACLY|ATP6V0A1|BECN1|CBX1|CDC27|COA3|DUSP3|EZH1|G6PC3|GPATCH8|KPNB1|KRT10|MLX|MPP2|NBR1|NKIRAS2|NMT1|NPEPPS|NSF|PNPO|PSMC3IP|PSME3|RAB5C|RETREG3|SMARCE1|SNX11|STAT5B|TMUB2
BOYAULT_LIVER_CANCER_SUBCLASS_G3_UP	0		2.1580190723e-05	13	7.1462517689e-07	COIL|CSNK1D|EIF4A3|HGS|LRRC59|NME1|NOL11|PHB|PRKAR1A|SAP30BP|SMG8|UTP18|WDR45B	10	4.24457562691e-05	ACACA|CASC3|DUSP3|KPNB1|MED1|NLE1|NPEPPS|NSF|PSMD11|PSME3
CAIRO_HEPATOBLASTOMA_CLASSES_UP	0		0.000338820358943	19	0.000262810017713	AAMP|CCDC47|COIL|DDX42|EIF4A3|GPS1|LRRC59|MRPL12|MRPS7|NME1|NOL11|NUP85|PHB|RPS6KB1|SEPT9|SRSF1|SUPT4H1|TEX2|UTP18	17	0.000414830700173	AARSD1|AATF|ACLY|AP2B1|BLMH|CDC27|DNAJC7|KPNB1|LIG3|NLE1|RPL19|RPL23|TMEM97|TUBG1|UTP6|ZNF207|ZNHIT3
Human Brain_Lastowska07_256genes (17533364-TableS2)	0		2.2779610333e-13	60	1.57821943405e-72	ABCC3|AKAP1|ANAPC11|ANKRD40|ARL16|ARMC7|BAIAP2|BPTF|CCDC47|CEP95|DCAF7|DHX40|DUS1L|EIF4A3|ETV4|FOXK2|FTSJ3|GPS1|INTS2|JMJD6|LRRC59|LUC7L3|MED13|MKS1|MRPL27|MRPL38|MRPL58|MRPS7|MRPS23|MSI2|NAT9|NDUFAF8|NME1-NME2|NOL11|NUP85|PHB|POLG2|PPM1D|PSMC5|PTRH2|PYCR1|RAD51C|RPL38|RPS6KB1|SEC14L1|SGSH|SLC25A10|SLC25A19|SLC38A10|SMG8|SMURF2|SRP68|SRSF1|SUMO2|SUPT4H1|TACO1|TSEN54|TUBD1|UBE2O|UTP18	18	4.5559220666e-13	ACBD4|BRCA1|EZH1|FLOT2|GOSR1|HSD17B1|KPNB1|MRPL10|NEK8|RFFL|RNF135|SNORA21|STAT3|SYNRG|TMEM97|TNFAIP1|UTP6|WIPF2
Human Breast_Desmedt08_28genes_ERBB2_Module (18698033-tableS1-ERBB2)	0		0.000222092793351	4	0.0004441849761	CDK18|ITGA3|PHB|SPATA20	8	6.10601633164e-10	CASC3|ERBB2|GSDMB|LASP1|PGAP3|PNMT|PSMD3|WIPF2
Human Breast_Orsetti04_39genes (15374954-Table1)	0		7.15888385624e-05	10	1.86850136341e-13	COX11|GAA|GRB2|LLGL2|PRKAR1A|RAD51C|RPS6KB1|SMARCD2|SRP68|TOM1L1	4	0.000143177676938	ERBB2|GRB7|LASP1|RPL19
Human Ovarian_Presneau03_37genes (12629520-Table2)	0		3.74308116606e-05	4	7.35012719823e-05	AKAP1|COX11|NME1|PHB	5	1.36035133899e-06	BECN1|BLMH|NMT1|NPEPPS|STAT5A
LASTOWSKA_NEUROBLASTOMA_COPY_NUMBER_UP	0		2.53182746411e-13	62	6.57599609886e-76	ABCC3|AKAP1|ANAPC11|ANKRD40|ARL16|ARMC7|BAIAP2|BPTF|CCDC47|CEP95|DCAF7|DHX40|DUS1L|EIF4A3|ETV4|FOXK2|FTSJ3|GPS1|INTS2|JMJD6|LRRC59|LUC7L3|MCRIP1|MED13|MKS1|MRPL12|MRPL27|MRPL38|MRPL58|MRPS7|MRPS23|MSI2|NAT9|NDUFAF8|NME1|NOL11|NUP85|PHB|POLG2|PPM1D|PSMC5|PTRH2|PYCR1|RAD51C|RPL38|RPS6KB1|SEC14L1|SGSH|SLC25A10|SLC25A19|SLC38A10|SMG8|SMURF2|SRP68|SRSF1|SUMO2|SUPT4H1|TACO1|TSEN54|TUBD1|UBE2O|UTP18	18	5.06365492822e-13	ACBD4|BRCA1|EZH1|FLOT2|GOSR1|HSD17B1|KPNB1|MRPL10|NEK8|RFFL|RNF135|RPL23|STAT3|SYNRG|TMEM97|TNFAIP1|UTP6|WIPF2
MYLLYKANGAS_AMPLIFICATION_HOT_SPOT_12	0		0.000165190570661	3	0.000330380268538	ASPSCR1|CLTC|ETV4	6	8.7278363868e-10	BRCA1|ERBB2|LASP1|MLLT6|NF1|SUZ12
chr17q21	0		1.46148331293e-22	31	2.92296662587e-22	ABCC3|AKAP1|ANKRD40|APPBP2|CALCOCO2|DDX5|ETV4|ITGA3|KAT7|LRRC59|LUC7L3|MKS1|MRPL27|NME1|NME1-NME2|PCTP|PDK2|PHB|RSAD1|SLC35B1|SNF8|SPAG9|SPATA20|SPOP|SRSF1|SUPT4H1|TOB1|TOB1-AS1|UBE2Z|UTP18|XYLT2	74	2.87574801799e-89	AARSD1|ACACA|ACBD4|ACLY|ATP6V0A1|BECN1|BRCA1|CBX1|CCDC43|COA3|DCAKD|DDX52|DHX8|DUSP3|EFTUD2|EIF1|EZH1|FBXL20|G6PC3|GGNBP2|GHDC|GPATCH8|GSDMB|HDAC5|KANSL1|KPNB1|KRT10|LINC02210|LSM12|MLLT6|MLX|MRPL10|MRPL45|MSL1|NAGS|NBR1|NBR2|NFE2L1|NKIRAS2|NMT1|NSF|NT5C3B|OSBPL7|PEX12|PGAP3|PIP4K2B|PLEKHH3|PLEKHM1|PNMT|PNPO|PSMC3IP|PSMD3|PYY|RAB5C|RAPGEFL1|RETREG3|RUNDC1|SCRN2|SMARCE1|SNX11|SOCS7|SP2|STAT3|SUZ12|TMEM99|TMEM101|TMUB2|TUBG1|TUBG2|UBTF|VAT1|VPS25|WIPF2|ZNHIT3
